BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023C12LP1|AL428032
(1022 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1658 1552 0.0
>3x_Contig1658
Length = 13395
Score = 1552 bits (782), Expect = 0.0
Identities = 791/794 (99%), Gaps = 1/794 (0%)
Strand = Plus / Minus
Query: 230 gggaattggagcgagcaatatattgtactaatggctagacctctcaatagaccaggtcac 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13395 gggaattggagcgagcaatatattgtactaatggctagacctctcaatagaccaggtcac 13336
Query: 290 ccgagttcattccacaaacgacaaaacactacaagaggatagaggacatacttaacagct 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13335 ccgagttcattccacaaacgacaaaacactacaagaggatagaggacatacttaacagct 13276
Query: 350 agtttcagttcctgcagttcctgcattcttaataggcagcatctcatatgccacgatgat 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13275 agtttcagttcctgcagttcctgcattcttaataggcagcatctcatatgccacgatgat 13216
Query: 410 gataggtacagggttctcaagtcgttcttcatttctgttgtatgttgtaatacttattgt 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13215 gataggtacagggttctcaagtcgttcttcatttctgttgtatgttgtaatacttattgt 13156
Query: 470 ggtaaccaaatcaggtaatttgtatgacagaaattgaaactaaccgtggaaggttattcg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13155 ggtaaccaaatcaggtaatttgtatgacagaaattgaaactaaccgtggaaggttattcg 13096
Query: 530 caaaatagttcttggaactatgagcagtacttgatagatattcacacttaagtttaaccg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13095 caaaatagttcttggaactatgagcagtacttgatagatattcacacttaagtttaaccg 13036
Query: 590 taaagatcttcagtttggttatgacgacttaatttctcaaataggcaattacacagtgac 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13035 taaagatcttcagtttggttatgacgacttaatttctcaaataggcaattacacagtgac 12976
Query: 650 atcttcaagacggccattaataaagtaaaacatatataaragtactaattggctcagata 709
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12975 atcttcaagacggccattaataaagtaaaacatatataaaagtactaattggctcagata 12916
Query: 710 gttgaatgatatcgtcatcttcttattcccaattcatattacatagttggtaggtatcaa 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12915 gttgaatgatatcgtcatcttcttattcccaattcatattacatagttggtaggtatcaa 12856
Query: 770 cgaaatacaccatgattttaccttctctcacaattctatgtttactgacatctttaataa 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12855 cgaaatacaccatgattttaccttctctcacaattctatgtttactgacatctttaataa 12796
Query: 830 actgtcgtcaaatagagttcgatcatgattcaaaagtcattcagctgcaactacttaaac 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12795 actgtcgtcaaatagagttcgatcatgattcaaaagtcattcagctgcaactacttaaac 12736
Query: 890 cagctgatagaagtctacagaaaagatctaaaagttttgaaagtaaactaaatccacagg 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12735 cagctgatagaagtctacagaaaagatctaaaagttttgaaagtaaactaaatccacagg 12676
Query: 950 actacttttataccgttgaacttggtgtaggt-cmccatcgcagaaaataaattgtatat 1008
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 12675 actacttttataccgttgaacttggtgtaggtacaccatcgcagaaaataaattgtatat 12616
Query: 1009 tcgatactggatcg 1022
||||||||||||||
Sbjct: 12615 tcgatactggatcg 12602
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7881
Number of Sequences: 1807
Number of extensions: 7881
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 1022
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1006
effective length of database: 10,329,639
effective search space: 10391616834
effective search space used: 10391616834
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)